Examining Numbers in OpenRefine
OverviewTeaching: 10 min
Exercises: 10 minQuestions
How can we convert a column from one data type to another?
How can we visualize relationships among columns?Objectives
Transform a text column into a number column.
Identify and modify non-numeric values in a column using facets.
Use scatterplot facet to examine relationships among columns.
When a table is imported into OpenRefine, all columns are treated as having text values. We saw earlier how we can sort column values as numbers, but this does not change the cells in a column from text to numbers. Rather, this interprets the values as numbers for the purposes of sorting but keeps the underlying data type as is. We can, however, transform columns to other data types (e.g. number or date) using the
Edit cells >
Common transforms feature. Here we will experiment changing columns to numbers and see what additional capabilities that grants us.
Be sure to remove any
Text filter facets you have enabled from the left panel so that we can examine our whole dataset. You can remove an existing facet by clicking the
x in the upper left of that facet window.
To transform cells in the
recordID column to numbers, click the down arrow for that column, then
Edit cells >
Common transforms… >
To number. You will notice the
recordID values change from left-justified to right-justified, and black to green color.
Transform three more columns, including
period, from text to numbers. Can all columns be transformed to numbers?
Only observations that include only numerals (0-9) can be transformed to numbers. If you apply a number transformation to a column that doesn’t meet this criteria, and then click the
Undo / Redotab, you will see a step that starts with
Text transform on 0 cells. This means that the data in that column was not transformed.
Sometimes there are non-number values or blanks in a column which may represent errors in data entry and we want to find them.
We can do that with a
- For a column you transformed to numbers, edit one or two cells, replacing the numbers with text (such as
abc) or blank (no number or text).
- Use the pulldown menu to apply a numeric facet to the column you edited. The facet will appear in the left panel.
- Notice that there are several checkboxes in this facet:
Error. Below these are counts of the number of cells in each category. You should see checks for
Blankif you changed some values.
- Experiment with checking or unchecking these boxes to select subsets of your data.
When done examining the numeric data, remove this facet by clicking the
x in the upper left corner of its panel. Note that this does not undo the edits you made to the cells in this column. If you want to reverse these edits, use the
Undo / Redo function.
Now that we have multiple columns representing numbers, we can see how they relate to one another using the scatterplot facet. Select a numeric column, for example
recordID, and use the pulldown menu to >
Scatterplot facet. A new window called
Scatterplot Matrix will appear. There are squares for each pair of numeric columns organized in an upper right triangle. Each square has little dots for the cell values from each row.
- Examine the scatterplots overall. Do the patterns make sense?
- Why does the scatterplot for
periodhave the pattern it does?
Examine pair of columns in detail
We can examine one pair of columns by clicking on its square in the
Scatterplot Matrix A new facet with only that pair will appear in the left margin.
Click in the scatterplot facet in the left margin and drag to highlight a rectangle. This will subset the data to those entries.
- Click on the
Scatterplot Matrixsquare for
periodto get that as a facet in the left margin.
- Redo the
scientificNameto show only entries including the letters
bai. Notice the change in the scatterplot. It might be easier to see if you click
export plotto put it on a new browser tab.
OpenRefine also provides ways to get overviews of numerical data.